Similar HOG based on pairwise relations to

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0801468.10jib.6115a with 4 members (domain-containing protein)

Eukaryota / Opisthokonta / Metazoa / Eumetazoa / Bilateria / Deuterostomia / Chordata /

... /

Vertebrata / Gnathostomata / Euteleostomi / Sarcopterygii / Tetrapoda / Amniota / Mammalia / Theria / Eutheria / Boreoeutheria / Euarchontoglires / Primates / Haplorrhini / Simiiformes /

Platyrrhini /

Completeness score: 1.00

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This HOG has 66 similar HOGs:

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Rank	HOG ID	Shared orthologs	HOG size	Description
1	HOG:E0801468.10jib.6115a	719	263	domain-containing protein
2	HOG:E0801468.10jib.6115a.4779b	121	31	domain-containing protein
3	HOG:E0801468.10jib.6115a.4785b	56	14	domain-containing protein
4	HOG:E0801468.8euo	51	17	domain-containing protein
5	HOG:E0801468.7ir	37	14	domain-containing protein
6	HOG:E0801468.10jib.6115a.4782a	32	8	domain-containing protein
7	HOG:E0801468.10jib.6113a.4775b	30	8	domain-containing protein
8	HOG:E0801468.9irw	23	14	domain-containing protein
9	HOG:E0801468.8hox.1508a	21	14	domain-containing protein
10	HOG:E0801468.10jib.6113a.4775a	20	5	domain-containing protein
11	HOG:E0801468.8hox.1507a	19	11	domain-containing protein
12	HOG:E0801468.10jib.6113a	19	18	domain-containing protein
13	HOG:E0801468.10mpi	17	8	domain-containing protein
14	HOG:E0801468.9irw.4279a	15	4	domain-containing protein
15	HOG:E0067426	15	11	Centrosomal protein CEP104 N-terminal domain-containing protein
16	HOG:E0801468.10jib.6115a.4781a	12	3	domain-containing protein
17	HOG:E0801468.10jib.6115a.4780b	12	3	domain-containing protein
18	HOG:E0801468.10jib	12	289	domain-containing protein
19	HOG:E0801468.9irw.4279b.3268a	8	2	domain-containing protein
20	HOG:E0801468.8hox	8	37	domain-containing protein
21	HOG:E0801468.10jib.6115a.4783a	8	2	domain-containing protein
22	HOG:E0801468.10jib.6115a.4776a	8	2	domain-containing protein
23	HOG:E0801468.10jib.6114a	8	2	domain-containing protein
24	HOG:E0801468.9irw.4279b	4	4	domain-containing protein
25	HOG:E0801468.8hox.1507d	4	1	domain-containing protein

Showing 1 to 25 of 66 rows rows per page